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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907796.1_cds_XP_016457910.1_51587
CDS Infomation

[gene=LOC107781688] [db_xref=GeneID:107781688] [protein=embryogenesis-associated protein EMB8-like isoform X2] [protein_id=XP_016457910.1] [location=join(13637..13887,14121..14210,14539..14600,15370..15470,15799..15888,16344..16466,17027..17104,17879..17964,18137..18185,19146..19202,19283..19413,19910..19993,20377..20443,20638..21063)] [gbkey=CDS]
Sequence

ATGGATTGCATTGAGTTTAGCTCAGAATCCCCATATGAGCTTTTGCTGAAAGCTGCTTTC
TTGATACCTACTTCTCATTATTTCTTGGGCGTCCTGTTTTTACTGTGTGTATTCCTCTAT
CATTTCGTGGAGATTCACTTCTTTCAAGATTTATTCACTGCGTTTAGGGGACAGCCTGTG
TCCTTGACATTTAACCATTCCTCTGAGCTGTATCAAGAGGTTGTTTCCAAATGTAAAATT
CTACATGGCAGGTATTTGTCTACTCCATGGCTTTGCAGTCCTCATATCCAGACTGCCTTT
TTACAGTTCTTTGGAAGGGCACCCGTTTGCAACTATAGAAGACAGATATTTCGTACGTCT
GATGGTGGGACAATAGCTTTGGATTGGCTAACGAATGCGGATGTTAAAAAGCCAGCCGTT
GAACGTTTTGATGGATTTCACAGTGATGATAAAGGTCCCATAATGGTAGTGATTCCTGGT
TTAACAAGTGACTCTGATTCTGCTTACATAAAGCATCTTGCCTTTAAGATGGCTAAAAGT
GGATGGAATGTCGTTGTGAGCAATCATCGGGGTCTCGGCGGAGTGTCAATAACTTCTGAT
TGCTTTTATAATGCTGGATGGACGGAGGACGCCCGCAAAGTGATTGACCATCTTCACACC
CAATACCCTCAAACTCCTTTATTTGTTGTTGGGACTAGCATTGGTGCTAATGTTCTGGTA
AAATATCTTGGTGAGGAAGGAGTTAATACTGCAATTGTTGGGGCAGCTGCTATCTGTTCT
CCGTGGGACCTTTTGATTGGTGACAGGTTTATTAAACGCAGGCTAGTGCAGAGATTCTAT
GACAGAGCTCTTTCAATTGGATTAAAAGATTATGCCAAGCTGCATCAGACTACTTGGTCC
CGTTTGGCAGATTGGGAAGGCATTGCTAAGTCACGTTCTATCAGAGATTTTGACCACCAT
GCTACTCGTATTCTTGCTAATCTTGAGACTGTTGATACATATTACAGAAAAGCAAGCTGT
ACCAGTTATATAGGGAATGTGATGGTTCCCCTCCTCTGCATTAGTAGCTTGGATGATCCA
GTCTGTACAAGAGAAGCAATTCCATGGGATGAATGTAGGGCAAACAAAAATATCGTACTA
GCTACCACGCACCATGGTGGACACTTGGCATATTTTGAAGGGATTACTGCAAAAAGCCTC
TGGTGGGTTAGGGCTGTTGAAGAATATTTTCGTGCTTTGAAATCCAGCTCATTGATCCAT
CGAGAAAACAATACCACAGTGGATAGTCCCCTGGAATCATCCATTGATCAGGCGCCATAT
GTGAATGTCAGAGAAGACGGAATGATAACTGCATTTAGCAATGAGCCATCAGGTGATGCA
GGAAGTCAGCAGAATGAGCAATTGGCTGAAGATGACAATGCTGGAGATTGTGTTAGAGGT
GTCAATGCTACAGTGCAGCAAGAAGAAACAAATGCAACAACTCAGCTTGATCCTGCTCCG
AAAGCAGATTTTGATGCAATGATGGTTCCTGTTAAGAGATGTCTTAATCAGCTCTCTCGG
CGTAGCAAGATTTCAATGTGGGTACTTGCATATGCTGCAATCATAACCACATTGCCAATT
CTCGGTTCAGCTTTACCACTGTTTTTCAAGAAAAAGCTGCGCAATATTTTTTCGCTATCT
TCTCCCAAAAGATGA

Peptide Sequence

PEP ID

XP_016457910.1
PEP Infomation

PREDICTED: embryogenesis-associated protein EMB8-like isoform X2 [Nicotiana tabacum]
Sequence

MDCIEFSSESPYELLLKAAFLIPTSHYFLGVLFLLCVFLYHFVEIHFFQDLFTAFRGQPV
SLTFNHSSELYQEVVSKCKILHGRYLSTPWLCSPHIQTAFLQFFGRAPVCNYRRQIFRTS
DGGTIALDWLTNADVKKPAVERFDGFHSDDKGPIMVVIPGLTSDSDSAYIKHLAFKMAKS
GWNVVVSNHRGLGGVSITSDCFYNAGWTEDARKVIDHLHTQYPQTPLFVVGTSIGANVLV
KYLGEEGVNTAIVGAAAICSPWDLLIGDRFIKRRLVQRFYDRALSIGLKDYAKLHQTTWS
RLADWEGIAKSRSIRDFDHHATRILANLETVDTYYRKASCTSYIGNVMVPLLCISSLDDP
VCTREAIPWDECRANKNIVLATTHHGGHLAYFEGITAKSLWWVRAVEEYFRALKSSSLIH
RENNTTVDSPLESSIDQAPYVNVREDGMITAFSNEPSGDAGSQQNEQLAEDDNAGDCVRG
VNATVQQEETNATTQLDPAPKADFDAMMVPVKRCLNQLSRRSKISMWVLAYAAIITTLPI
LGSALPLFFKKKLRNIFSLSSPKR

Transcript Sequence

Gene sequence data has not been registered.